Information for 17-GACTGTGAAG (Motif 42)

A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.214e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 27.9bp
Average Position of motif in Background67.2 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACTGTGAAG
-GCTGTG---
 A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GACTGTGAAG-
-----NGAAGC
 A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GACTGTGAAG
-GCTGTCAA-
 A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GACTGTGAAG
AAGGTGTKAA-
 A C G T A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACTGTGAAG
ATGACCTTGAA-
 A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACTGTGAAG
WDNCTGGGCA-
 A C G T A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GACTGTGAAG-
-CCTTTGAWGT
 A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GACTGTGAAG-
-CCTTTGATGT
 A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GACTGTGAAG
TAGGTGTGAAG
 A C G T A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACTGTGAAG
-CCTGTCAA-
 A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C T G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T