Information for 21-CTGCTCCTGGAGGTGC (Motif 40)

A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
Reverse Opposite:
C T A G G T A C T G C A T A G C G T A C C A G T A T G C A G T C G T C A A T C G T A C G T G C A A C T G T A G C G T C A T A C G
p-value:1e-6
log p-value:-1.421e+01
Information Content per bp:1.637
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 16.1bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTGCTCCTGGAGGTGC--
------SDGCAGGTGCNS
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTCCTGGAGGTGC
NNTNCGCACCTGTNGAN--
 A C G T A C G T A C G T A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGCTCCTGGAGGTGC
CTGTTCCTGG------
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGCTCCTGGAGGTGC
-CGCACCTGCT-----
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCTCCTGGAGGTGC
--GRTGMTRGAGCC--
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGCTCCTGGAGGTGC
-TACACCTGTC-----
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGCTCCTGGAGGTGC
-NNCACCTGNN-----
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGCTCCTGGAGGTGC
-AACACCTGCT-----
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CTGCTCCTGGAGGTGC
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTGCTCCTGGAGGTGC-
-------CGCAGCTGCG
 A T G C C A G T A T C G T A G C A C G T A T G C A T G C C A G T A C T G T A C G G T C A C A T G A T C G A C G T C A T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G