Information for 20-TCYCYAATCCACT (Motif 38)

A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T A C T G C T A G C G T A A C G T A C G T C T G A A C T G C T G A A C T G C G T A
p-value:1e-6
log p-value:-1.421e+01
Information Content per bp:1.912
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 26.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCYCYAATCCACT--
---SSAATCCACANN
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TCYCYAATCCACT-
---CTAATCCTCTT
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T A C G T
A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCYCYAATCCACT
--TCCAATCCACA
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:forward strand
Alignment:TCYCYAATCCACT
------ATCCAC-
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCYCYAATCCACT--
AATCGTTAATCCCTTTA
 A C G T A C G T A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCYCYAATCCACT
--GCTAATCC---
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCYCYAATCCACT
--GCTAATCCCC-
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCYCYAATCCACT
--CCTAATCCGC-
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCYCYAATCCACT
--CTTAATCCC--
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCYCYAATCCACT
--NYTAATCCYB-
 A C G T A G T C A G C T A G T C A G C T C G T A C G T A C G A T A G T C A G T C C G T A A G T C A G C T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T