Information for 18-CTGTGYCTCYCACANN (Motif 36)

A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
Reverse Opposite:
G T C A A C G T C A G T A C T G A C G T A C T G C T A G A C T G C G T A A C T G C T A G A G T C C G T A A T G C G T C A A C T G
p-value:1e-6
log p-value:-1.505e+01
Information Content per bp:1.757
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.6 +/- 22.9bp
Average Position of motif in Background55.7 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTGTGYCTCYCACANN
--CTGTCTGTCACCT-
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTGTGYCTCYCACANN
---TGTCTGDCACCT-
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGYCTCYCACANN
GCTCGGSCTC-------
 A C G T A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGTGYCTCYCACANN
-NCTGTCAATCAN---
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGTGYCTCYCACANN
-SCTGTCAVTCAV---
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGTGYCTCYCACANN
----YCCGCCCACGCN
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGTGYCTCYCACANN
------CRCCCACGCA
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGTGYCTCYCACANN
----GCCACACCCA--
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGTGYCTCYCACANN
GCTGTG-----------
 A C G T A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTGTGYCTCYCACANN
----GCCACRCCCACY
 A G T C A C G T T A C G A C G T A C T G A G T C A G T C C G A T A G T C A G T C G T A C G T C A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T