Information for 14-GCCMRSGAGCTGGCAY (Motif 24)

A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T
Reverse Opposite:
C T G A A G C T A C T G A G T C A G T C C G T A A T C G A G T C A C G T A T G C A T C G A G T C A C G T A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.886
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.5 +/- 23.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:GCCMRSGAGCTGGCAY
-------GGTTGGCAT
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCMRSGAGCTGGCAY---
TGGCCACCAGGTGGCACTNT
 A C G T A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCMRSGAGCTGGCAY---
---NGTAGGTTGGCATNNN
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCMRSGAGCTGGCAY----
---NNNCAGCTGTCAATATN
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCMRSGAGCTGGCAY---
---AACGAGCTGTCAATAC
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCMRSGAGCTGGCAY---
---AAAGACCTGTCAATCC
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GCCMRSGAGCTGGCAY
-------ARNTGACA-
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCMRSGAGCTGGCAY---
---AACTAGCTGTCAATAC
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:GCCMRSGAGCTGGCAY-
--------NTTGGCANN
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GCCMRSGAGCTGGCAY
-------NGTGGGCAT
 A C T G A G T C A G T C G T C A C T A G A T G C A T C G C G T A A C T G A T G C A C G T A C T G A C T G A G T C C T G A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T