Information for 12-GGCCTCAGCGGAGGGC (Motif 19)

C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C
Reverse Opposite:
C T A G A T G C A G T C A T G C A C G T A T G C A T G C A C T G A T G C G A C T A T C G C T G A A C T G T C A G A G T C A G T C
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.767
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.4 +/- 18.9bp
Average Position of motif in Background41.6 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGCCTCAGCGGAGGGC-
---CACAGCGGGGGGTC
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTCAGCGGAGGGC
CAGGCCNNGGCCNN----
 A C G T A C G T C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCCTCAGCGGAGGGC-
--NCGCAGCGGGGGGTC
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGCCTCAGCGGAGGGC-
-----NCGCGGACGTTG
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGCCTCAGCGGAGGGC-
--NCNCAGCGGGGGGTC
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCCTCAGCGGAGGGC-
--DCHCAGCAGGRGGCC
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCCTCAGCGGAGGGC
-GCCTCAGGGCAT---
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCCTCAGCGGAGGGC
GTCCCCAGGGGA----
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCAGCGGAGGGC
GAGSCCGAGC-------
 A C G T C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCCTCAGCGGAGGGC
TGCCCNGGGGCA----
 C T A G A C T G A G T C A G T C A G C T A T G C C T G A A T C G A G T C A T C G A T C G G T C A A T C G C T A G A T C G A G T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T