Information for 10-CCCGCAGDGCVCGATG (Motif 16)

A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C A T C G A C G T A T C G A G T C G T C A A G T C C G A T A C T G G T A C A T C G A C T G A C T G
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets23.8 +/- 11.7bp
Average Position of motif in Background45.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGDGCVCGATG
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCGCAGDGCVCGATG
CCTGCTGAGH------
 A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCAGDGCVCGATG
TGCCCNNAGGGCA-----
 A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCGCAGDGCVCGATG
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCGCAGDGCVCGATG
TGCCCTGAGGGCA-----
 A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCGCAGDGCVCGATG
GCCGCGCAGTGCGT----
 A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCAGDGCVCGATG
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGDGCVCGATG
GACCCCCCGCTGCGC------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCAGDGCVCGATG
GACCCCCCGCTGTGC------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCAGDGCVCGATG
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C A G T C A T G C A C T G A G T C C G T A A C T G C A G T A C T G A T G C T G A C A T G C C T A G G T C A A C G T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T