Information for 7-CAAGCCGRGCCTGMTG (Motif 11)

T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G
Reverse Opposite:
T A G C G T C A A C G T A T G C C G T A A T C G A T C G G A T C A G T C T A G C T C A G A C T G A T G C A C G T A G C T A T C G
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.670
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif79.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets57.3 +/- 22.7bp
Average Position of motif in Background52.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAGCCGRGCCTGMTG
GGGGCCGAGGCCTG---
 A C G T T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG
---GCTCGGSCTC---
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG--
---GGNGCGNCTGTTNNN
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CAAGCCGRGCCTGMTG---
---------CCTGCTGAGH
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG--
-------TGCCTGAGGCN
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG--
-------NGCCTGAGGCN
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG-----
------TNTCCTGCTGTGNNG
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG-----
------NNTCCTGCTGTGNNN
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG--
------CCCCCTGCTGTG
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CAAGCCGRGCCTGMTG--
-------NGCCTNAGGCN
 T A G C T C G A T G C A A T C G G T A C A G T C A T C G C T A G C T A G A T G C A T G C A C G T A T C G G T C A C A G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T