Information for 5-ATAGWGTKKTARGCTT (Motif 10)

T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T
Reverse Opposite:
C T G A C G T A A T C G A T G C A G C T A G C T G T C A G T C A T G C A C T G A A T G C C G A T A G T C A G C T T C G A A G C T
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.655
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.4 +/- 13.9bp
Average Position of motif in Background59.9 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.61
Offset:10
Orientation:reverse strand
Alignment:ATAGWGTKKTARGCTT-
----------AAGCTTG
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ATAGWGTKKTARGCTT
--AAGGTGTKAA----
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:ATAGWGTKKTARGCTT-
--AGNGTTCTAATGANN
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T A C G T
A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.44
Offset:11
Orientation:reverse strand
Alignment:ATAGWGTKKTARGCTT
-----------NGCTN
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.44
Offset:12
Orientation:forward strand
Alignment:ATAGWGTKKTARGCTT--
------------GCTTCC
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.44
Offset:-1
Orientation:forward strand
Alignment:-ATAGWGTKKTARGCTT
GAAAAGGTGTGAAAATT
 A C G T T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.43
Offset:9
Orientation:reverse strand
Alignment:ATAGWGTKKTARGCTT-
---------NGGGATTA
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.43
Offset:8
Orientation:forward strand
Alignment:ATAGWGTKKTARGCTT
--------TGTCGGTT
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.42
Offset:3
Orientation:reverse strand
Alignment:ATAGWGTKKTARGCTT
---AGGTGTTAAT---
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T
A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.42
Offset:2
Orientation:forward strand
Alignment:ATAGWGTKKTARGCTT
--AAGGTGTGAAA---
 T C G A A G C T C T G A C T A G G C T A T A C G G A C T A C G T C A G T C A G T T C G A C T G A T A C G T A G C A C G T G A C T
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T