Information for 11-GAGCCDAGTG (Motif 9)

C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G
Reverse Opposite:
A T G C G T C A T A G C A C G T G C A T A C T G A T C G A G T C C A G T A G T C
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.752
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif226.9
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets58.0 +/- 27.1bp
Average Position of motif in Background49.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAGCCDAGTG---
---TTRAGTGSYK
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Mycn/MA0104.3/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGCCDAGTG
--GCCACGTG
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCCDAGTG-----
CGACCAACTGCCGTG
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGCCDAGTG
CGTGCCAAG--
 A C G T C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCCDAGTG-
AAGGCAAGTGT
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGCCDAGTG
GGTGCCAAGT-
 A C G T C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGCCDAGTG
-TGCCAA---
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGCCDAGTG---
--ACCACGTGCTC
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGCCDAGTG
--ACCACGTG
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G
A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGCCDAGTG--
--KCCACGTGAC
 C T A G G T C A C T A G A T G C A G T C C G T A C G T A A T C G A C G T A T C G A C G T A C G T
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C