Information for 3-GCACAGCWGGAAACCT (Motif 6)

A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
Reverse Opposite:
T C G A A C T G A T C G A G C T G A C T A G C T A G T C G T A C G C T A A T C G A G T C C G A T A T C G A C G T A C T G G T A C
p-value:1e-12
log p-value:-2.982e+01
Information Content per bp:1.646
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif51.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.5 +/- 29.0bp
Average Position of motif in Background51.5 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GCACAGCWGGAAACCT
DCHCAGCAGGRGGCC-
 A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCACAGCWGGAAACCT
GAGCACAGCAGGACA---
 A C G T A C G T A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCACAGCWGGAAACCT
CCACACAGCAGGAGA---
 A C G T A C G T A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCACAGCWGGAAACCT
CCACACAGCAGGAGA---
 A C G T A C G T A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCACAGCWGGAAACCT
-CACAGCAGGGGG---
 A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCACAGCWGGAAACCT
DCTCAGCAGG------
 A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCACAGCWGGAAACCT
NAACAGCTGG------
 A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCACAGCWGGAAACCT
-CACAGCGGGGGGTC-
 A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCACAGCWGGAAACCT
-AACAGCTG-------
 A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCACAGCWGGAAACCT
-AACATCTGGA-----
 A C T G G T A C T G C A T A G C G C T A T A C G T A G C C G A T C A T G T C A G T C G A C T G A T C G A T A G C A G T C A C G T
A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T A C G T