Information for 3-CGGCTGGGCT (Motif 4)

G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
Reverse Opposite:
T C G A C T A G T A G C G A T C T A G C C T G A A T C G T G A C T G A C C T A G
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.652
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif17.80%
Number of Background Sequences with motif4500.7
Percentage of Background Sequences with motif9.52%
Average Position of motif in Targets53.0 +/- 24.8bp
Average Position of motif in Background49.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGGCTGGGCT
WDNCTGGGCA
 G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CGGCTGGGCT
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGCTGGGCT
NAACAGCTGG---
 A C G T A C G T A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGCTGGGCT
-NGCTN----
 G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CGGCTGGGCT
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGGGCT
CTGTCTGG---
 A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGGGCT
CCCCCTGCTGTG--
 A C G T A C G T A C G T A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGGGCT-
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGCTGGGCT
GGGGGCGGGGCC
 A C G T A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGGCTGGGCT
NAHCAGCTGD---
 A C G T A C G T A C G T G A T C A C T G A C T G T A G C G A C T A T C G C T A G A T C G G A T C A G C T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T