Information for 16-CCGGTCTCTTTTT (Motif 24)

A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A G T C A C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C T G A C T G
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.6 +/- 26.4bp
Average Position of motif in Background51.5 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCGGTCTCTTTTT-----
---TTCTATTTTTAGNNN
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGGTCTCTTTTT--
-CAGTTTCGNTTCTN
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCGGTCTCTTTTT---
----KCTATTTTTRGH
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGGTCTCTTTTT-
--AGTTTCAKTTTC
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCGGTCTCTTTTT--
TCAGTTTCATTTTCC
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGGTCTCTTTTT-
--AGTTTCAGTTTC
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCGGTCTCTTTTT---
----GCTATTTTTAGC
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCGGTCTCTTTTT---
----TCTATTTTTAGA
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCGGTCTCTTTTT---
----TCTATTTATAGN
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCGGTCTCTTTTT-
--RSTTTCRSTTTC
 A G T C G T A C A C T G A C T G G C A T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C