| p-value: | 1e-8 |
| log p-value: | -1.918e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 0.46% |
| Number of Background Sequences with motif | 1.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 49.5 +/- 17.4bp |
| Average Position of motif in Background | 12.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | -1.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
| Match Rank: | 1 |
| Score: | 0.72
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CACTCGAGCA
NSCACTYVAV-- |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 2 |
| Score: | 0.72
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CACTCGAGCA
RSCACTYRAG-- |
|
|
|
NKX2-8/MA0673.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.69
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CACTCGAGCA
CCACTTGAA-- |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 4 |
| Score: | 0.67
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CACTCGAGCA
AASCACTCAA--- |
|
|
|
Nkx2-5(var.2)/MA0503.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.67
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CACTCGAGCA
AGCCACTCAAG-- |
|
|
|
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
| Match Rank: | 6 |
| Score: | 0.67
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CACTCGAGCA
MRSCACTYAA--- |
|
|
|
PH0111.1_Nkx2-2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CACTCGAGCA--
ATAACCACTTGAAAATT |
|
|
|
NKX2-3/MA0672.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CACTCGAGCA
ACCACTTGAA-- |
|
|
|
PH0171.1_Nkx2-1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----CACTCGAGCA-
TAAGCCACTTGAAATT |
|
|
|
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------CACTCGAGCA----
NGTGTTCAVTSAAGCGKAAA |
|
|
|
