Information for 12-GTTGTGCTGC (Motif 20)

C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C
Reverse Opposite:
T A C G T A G C T G C A T C A G T A G C T G C A T A G C T C G A T C G A G A T C
p-value:1e-7
log p-value:-1.747e+01
Information Content per bp:1.651
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.42%
Number of Background Sequences with motif2580.5
Percentage of Background Sequences with motif5.62%
Average Position of motif in Targets49.3 +/- 26.6bp
Average Position of motif in Background49.8 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTGCTGC
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GTTGTGCTGC-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTGTGCTGC
CCATTGTTNY--
 A C G T A C G T C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTGTGCTGC-
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTGCTGC-
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTTGTGCTGC------
GNCTGTASTRNTGBCTCHTT
 A C G T A C G T A C G T A C G T C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTTGTGCTGC
GCTGTGGTTT
 C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTTGTGCTGC-
AATTTGCTGAC
 C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTGCTGC-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTTGTGCTGC
----NGCTN-
 C T A G A G C T A G C T A T C G A C G T A T C G A G T C A C G T A T C G A T G C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T