Information for 6-RCAGGAAGCA (Motif 11)

C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
Reverse Opposite:
A G C T C T A G G A T C C A G T C G A T A G T C A G T C A C G T T C A G A G C T
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.753
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.27%
Number of Background Sequences with motif776.6
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets46.4 +/- 27.7bp
Average Position of motif in Background48.2 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:RCAGGAAGCA
ACAGGAAGTG
 C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCA
AACAGGAAGT-
 A C G T C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCA
NACAGGAAAT-
 A C G T C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-RCAGGAAGCA-
NDCAGGAARTNN
 A C G T C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:RCAGGAAGCA
ACAGGAAGTG
 C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.78
Offset:2
Orientation:forward strand
Alignment:RCAGGAAGCA----
--AGGAAACAGCTG
 C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCA
AACCGGAAGT-
 A C G T C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-RCAGGAAGCA
NACAGGAAAT-
 A C G T C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCA
ANCAGGAAGT-
 A C G T C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-RCAGGAAGCA
AVCAGGAAGT-
 A C G T C T G A A G T C C G T A A C T G C T A G G C T A G T C A C T A G G A T C C T G A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T