Information for 2-AAWGTWACTGCTG (Motif 2)

C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G
Reverse Opposite:
A G T C C G T A T A C G A T G C C G T A A C T G C G A T C G A T C G T A A T G C G C A T A G C T C G A T
p-value:1e-13
log p-value:-3.211e+01
Information Content per bp:1.688
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif79.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets47.8 +/- 22.3bp
Average Position of motif in Background52.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFK/MA0496.1/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AAWGTWACTGCTG------
----AAANTGCTGACTNAG
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAWGTWACTGCTG----
--AGATGCTRCTRCCHT
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAWGTWACTGCTG--
----AATTTGCTGAC
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAWGTWACTGCTG--
AGAGRRACAGCWGAC
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

MAFF/MA0495.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAWGTWACTGCTG-------
--NAAAANTGCTGACTCAGC
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAWGTWACTGCTG----
AATCGCACTGCATTCCG
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAWGTWACTGCTG-----
---AAAWWTGCTGACWWD
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AAWGTWACTGCTG
AACAATGNTATTGTT-
 A C G T A C G T A C G T C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAWGTWACTGCTG--
---CCCCCTGCTGTG
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAWGTWACTGCTG---
----AAAATGCTGACT
 C G T A T C G A C G T A A T C G C G A T G C A T C G T A A G T C A C G T A T C G A T G C G C A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T