Information for 5-CTCTAATGAAGCA (Motif 10)

A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
Reverse Opposite:
C G A T A C T G A T G C A C G T C A G T A G T C C G T A A C G T A C G T C G T A C T A G C G T A A C T G
p-value:1e-10
log p-value:-2.468e+01
Information Content per bp:1.932
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.1 +/- 34.1bp
Average Position of motif in Background61.3 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCTAATGAAGCA
CACTAATT-----
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCTAATGAAGCA
--CTAATTAC---
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCTAATGAAGCA
-NNTAATTAGN--
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCTAATGAAGCA
-GKTAATGR----
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCTAATGAAGCA
--CTAATTAC---
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTAATGAAGCA
-NTTAATTAGN--
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCTAATGAAGCA
--CTAATTAN---
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTAATGAAGCA
-NNTAATTANN--
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCTAATGAAGCA
--TTAATTAA---
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T A C G T A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTAATGAAGCA
-NNTAATTAGN--
 A G T C A C G T A G T C C G A T C G T A C G T A A C G T C T A G G C T A C G T A A T C G A G T C C G T A
A C G T T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T