Information for 6-ATKTGATTWAAACCCA (Motif 6)

C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A
Reverse Opposite:
A C G T A C T G A T C G A T C G A C G T C G A T A G C T C G A T G C T A C G T A C G A T G T A C C G T A T G C A C G T A A C G T
p-value:1e-12
log p-value:-2.877e+01
Information Content per bp:1.721
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 27.7bp
Average Position of motif in Background52.9 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATKTGATTWAAACCCA
NNNTTTTAATTAANNNN--
 A C G T A C G T A C G T C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ATKTGATTWAAACCCA
TAATYNRATTAR------
 A C G T A C G T C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.51
Offset:8
Orientation:forward strand
Alignment:ATKTGATTWAAACCCA-
--------AAACCGCAA
 C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

PH0124.1_Obox5_1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ATKTGATTWAAACCCA---
--NANANTTAATCCCNNNN
 C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A A C G T A C G T A C G T
A C G T A C G T C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---ATKTGATTWAAACCCA
GTAATCDGATTA-------
 A C G T A C G T A C G T C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.50
Offset:8
Orientation:forward strand
Alignment:ATKTGATTWAAACCCA--
--------AAACCGCAAA
 C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--ATKTGATTWAAACCCA
TAATTNVATTAN------
 A C G T A C G T C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:forward strand
Alignment:ATKTGATTWAAACCCA--
--------AAACCACANN
 C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----ATKTGATTWAAACCCA
TNGAATTTCATTNAN-----
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--ATKTGATTWAAACCCA
TAATTAAATTA-------
 A C G T A C G T C G T A A C G T A C G T C G A T A C T G C G T A G A C T C G A T G C T A T C G A G C T A G T C A A T G C A T G C G T A C C G T A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T