Information for 9-ACCTAGGATA (Motif 43)

C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C A G T C A C G T C G T A A C T G A T C G A C G T
p-value:1e-6
log p-value:-1.589e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 29.1bp
Average Position of motif in Background34.0 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACCTAGGATA-----
CTACTAGGATGTNNTN
 A C G T C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCTAGGATA----
---AAGGATATNTN
 C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACCTAGGATA---
AAGATAAGATAACA
 A C G T C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACCTAGGATA
AAYTAGGTCA
 C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACCTAGGATA----
TACCCTAGTTACCGA
 A C G T C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACCTAGGATA---
-----AGATAAGA
 C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACCTAGGATA-
TATAAGTAGGTCAA
 A C G T A C G T A C G T C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACCTAGGATA------
CTACTTGGATACGGAAT
 A C G T C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----ACCTAGGATA--------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACCTAGGATA-----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G T C A C G T C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C