Information for 23-GCTGAGCTBTHCCGHC (Motif 39)

A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
Reverse Opposite:
A T C G C G T A G T A C T A C G C T A G C T A G C G T A T A C G C T G A A C T G A G T C G C A T A G T C G T C A A T C G G T A C
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.702
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif55.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.4 +/- 26.0bp
Average Position of motif in Background54.9 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTGAGCTBTHCCGHC
--TGACCTYA------
 A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTGAGCTBTHCCGHC
GCTGTGGTTT------
 A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGAGCTBTHCCGHC
NNNNTTGTGTGCTTNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGAGCTBTHCCGHC
NNGCGTGTGTGCNGCN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGCTBTHCCGHC
GTCTGTGGTTT------
 A C G T A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTGAGCTBTHCCGHC
-GTGACCTT-------
 A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGAGCTBTHCCGHC
GCTGTG----------
 A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGCTBTHCCGHC
NNTCCTGCTGTGNNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGAGCTBTHCCGHC
--TGACCYCT------
 A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTGAGCTBTHCCGHC
-CTGTTCCTGG-----
 A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G C T A G T C C G A T G A T C A G T C A T G C A C T G G A C T A T G C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T