Information for 6-GCMWRACCYTTGK (Motif 16)

A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A C G T A C T A G A C T G T A C G A C G T A G C T C G T A A C T G A C T G A T G C
p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.4 +/- 25.6bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCMWRACCYTTGK--
NNNNTGACCTTTNNNN
 A C G T A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GCMWRACCYTTGK-
------CCTTTGTT
 A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCMWRACCYTTGK
--CTGACCTTTG-
 A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GCMWRACCYTTGK-
------CCWTTGTY
 A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCMWRACCYTTGK--
NNNGTGACCTTTGNNN
 A C G T A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCMWRACCYTTGK--
---TGACCTTTNCNT
 A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCMWRACCYTTGK
CNNTTGACCTTTG-
 A C G T A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GCMWRACCYTTGK---
------CCWTTGTYYB
 A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GCMWRACCYTTGK---
------CCTTTGTTTT
 A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCMWRACCYTTGK----
---TGACCTTTGACCTN
 A T C G A G T C G T A C G C A T C T G A C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C