Information for 9-CGGCGCAGGA (Motif 19)

A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 14.6bp
Average Position of motif in Background50.5 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCAGGA-
AAGGKGRCGCAGGCA
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGCGCAGGA--
-TGCGCAGGCGC
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGCGCAGGA--
--GGGCGGGACC
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGGCGCAGGA-----
---NDCAGGAARTNN
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGCGCAGGA---
--GGGCGGGAAGG
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGGCGCAGGA----
----ACAGGAAGTG
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGCGCAGGA
-GGCGCGCT-
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGCGCAGGA--
CTGCGCATGCGC
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGGCGCAGGA---
---NACAGGAAAT
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGCGCAGGA
CGGAGC----
 A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G A C T G C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T