Information for 6-GCCAGAGACCTCAGTM (Motif 8)

A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
Reverse Opposite:
A C G T T C G A A G T C A G C T A C T G G T C A A C T G C A T G C A G T A G T C A G C T A G T C A C G T A C T G A C T G A T G C
p-value:1e-14
log p-value:-3.280e+01
Information Content per bp:1.759
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 20.6bp
Average Position of motif in Background62.4 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCAGAGACCTCAGTM-
GACAGAGATATCAGTGT
 A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGACCTCAGTM
GGTTAGAGACCT-----
 A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCAGAGACCTCAGTM
AGGTCANTGACCTN----
 A C G T A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGACCTCAGTM
TGCCAA-----------
 A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGACCTCAGTM
TCCCCTGGGGAC------
 A C G T A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGAGACCTCAGTM
TGACCCAGTGACCTAC---
 A C G T A C G T A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCCAGAGACCTCAGTM
--CAACGTCCGCGG--
 A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGACCTCAGTM
CGTGCCAAG----------
 A C G T A C G T A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GCCAGAGACCTCAGTM
ATTTCCCAGVAKSCY-----
 A C G T A C G T A C G T A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGACCTCAGTM
TCCCNNGGGACN------
 A C G T A C G T A T C G A G T C G T A C C G T A C T A G C T G A A C T G G T C A G A T C A G T C A C G T A G T C C T G A C T A G A G C T T G C A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T