Information for 18-CATAATCCTC (Motif 43)

A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G C G T A A C G T A C G T C G T A A C G T A C T G
p-value:1e-5
log p-value:-1.342e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 27.0bp
Average Position of motif in Background57.1 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC2/MA0891.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CATAATCCTC
CCTAATCCGC
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CATAATCCTC
-TTAATCCT-
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CATAATCCTC
NYTAATCCYB
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CATAATCCTC--
-CTAATCCTCTT
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CATAATCCTC
GCTAATCCCC
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CATAATCCTC
CTTAATCCC-
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CATAATCCTC
-TTAATCCC-
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CATAATCCTC
-YTAATCCY-
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CATAATCCTC
-TTAATCCG-
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CATAATCCTC
--TAATCCCN
 A G T C C G T A A C G T C G T A C G T A A C G T A G T C A G T C A C G T A G T C
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G