Information for 15-GCGCAGCTGG (Motif 39)

A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G
Reverse Opposite:
G A T C A G T C C G T A A T C G A G T C A C G T C T A G T A G C T A C G A T G C
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.832
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif281.5
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets56.3 +/- 24.3bp
Average Position of motif in Background53.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GCGCAGCTGG-
-CGCAGCTGCG
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GCGCAGCTGG--
--GCAGCTGTNN
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GCGCAGCTGG--
--NCAGCTGCTG
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCGCAGCTGG-
NNVVCAGCTGBN
 A C G T A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCGCAGCTGG--
--HCAGCTGDTN
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GCGCAGCTGG----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCGCAGCTGG--
--VCAGCTGBNN
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T A C G T
A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCGCAGCTGG
NAACAGCTGG
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GCGCAGCTGG--
-GACAGCTGCAG
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCGCAGCTGG--
--ACAGCTGTTN
 A T C G A T G C A T C G A G T C T G C A A C T G A T G C A C G T A C T G C T A G A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C