Information for 8-GACAAGTACTTGTTAM (Motif 12)

T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
Reverse Opposite:
C A T G C G A T T G C A C G T A G T A C T C G A C G T A C T A G A C G T C G T A T A G C A C G T A C G T A T C G C A G T A T G C
p-value:1e-13
log p-value:-3.058e+01
Information Content per bp:1.699
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.2 +/- 22.8bp
Average Position of motif in Background70.1 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAAGTACTTGTTAM
ACTCCAAGTACTTGGAA-
 A C G T A C G T T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACAAGTACTTGTTAM
CNTTAAGTACTTAANG-
 A C G T T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACAAGTACTTGTTAM
NATTTAAGTACTTANNA-
 A C G T A C G T T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACAAGTACTTGTTAM
NATTTAAGTACTTNAAA-
 A C G T A C G T T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T

TBX19/MA0804.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACAAGTACTTGTTAM-
TTTCACACCTAGGTGTGAAA
 A C G T A C G T A C G T T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C A C G T
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A

T/MA0009.2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACAAGTACTTGTTAM
TCACACCTAGGTGTGA-
 A C G T T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GACAAGTACTTGTTAM
---AAGCACTTAA---
 T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GACAAGTACTTGTTAM--
---CTATAATTGTTAGCG
 T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C A C G T A C G T
A C G T A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GACAAGTACTTGTTAM
---AATTATT------
 T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GACAAGTACTTGTTAM----
---GAAAACTAGTTAACATC
 T A C G G T C A A T G C C G T A T C G A A C T G G A C T C G T A A G T C A C G T A C G T A C T G A C G T A C G T C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C