Information for 7-CCTGTTAATC (Motif 11)

G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C
Reverse Opposite:
A C T G T C G A G C A T G A C T T G C A C T G A A T G C C G T A C T A G C T A G
p-value:1e-13
log p-value:-3.125e+01
Information Content per bp:1.661
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.79%
Number of Background Sequences with motif920.0
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets49.1 +/- 24.4bp
Average Position of motif in Background52.1 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTTAATC-
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCTGTTAATC--
NCTGTCAATCAN
 G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCTGTTAATC-
GSCTGTCACTCA
 A C G T G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTTAATC-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CCTGTTAATC--
----TTAATCCT
 G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCTGTTAATC
GCTGTCAA--
 G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCTGTTAATC---
---NYTAATCCYB
 G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CCTGTTAATC--
----TTAATCCG
 G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTTAATC-
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTTAATC-
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T G A T C G A T C G C A T A T C G G A C T A C G T C T G A C G T A A G C T T G A C A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C