Information for 1-AAGGTGATAA (Motif 1)

C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A
Reverse Opposite:
G A C T G C A T G T C A C G A T A G T C C G T A A G T C A G T C G A C T G C A T
p-value:1e-52
log p-value:-1.201e+02
Information Content per bp:1.551
Number of Target Sequences with motif298.0
Percentage of Target Sequences with motif39.68%
Number of Background Sequences with motif7780.6
Percentage of Background Sequences with motif16.29%
Average Position of motif in Targets49.6 +/- 25.7bp
Average Position of motif in Background49.8 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:AAGGTGATAA-
-AGGTGTTAAT
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAGGTGATAA
AAGGTGTKAA
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAGGTGATAA-
AAGGTGTGAAA
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AAGGTGATAA-
-AGGTGTGAAM
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AAGGTGATAA--
--NBWGATAAGR
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A A C G T A C G T
A C G T A C G T T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAGGTGATAA------
TAAACTGATAAGAAGAT
 A C G T C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AAGGTGATAA-
-AGGTGTGAAA
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A A C G T
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAGGTGATAA
AAGGTGTGAA
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.75
Offset:4
Orientation:forward strand
Alignment:AAGGTGATAA--
----AGATAAGA
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AAGGTGATAA
-AGGTGTCA-
 C G T A C T G A T C A G T C A G G C A T T C A G G C T A C A G T C G T A C T G A
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T