Information for 9-ATAACAAAGG (Motif 8)

G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G
Reverse Opposite:
A T G C A T G C G C A T A G C T C A G T A T C G C G A T A G C T G T C A C G A T
p-value:1e-13
log p-value:-3.122e+01
Information Content per bp:1.670
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.38%
Number of Background Sequences with motif908.2
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets50.9 +/- 27.3bp
Average Position of motif in Background51.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---ATAACAAAGG----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---ATAACAAAGG----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:ATAACAAAGG
--AACAAAGG
 G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----ATAACAAAGG-
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:ATAACAAAGG
AAAACAAAGG
 G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:ATAACAAAGG
--RACAAWGG
 G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:ATAACAAAGG
VRRACAAWGG
 G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ATAACAAAGG
GGAACAAAGR
 G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:ATAACAAAGG-
-GAACAATGGN
 G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ATAACAAAGG
RNAACAATGG
 G C T A C A G T T C G A G C T A T A G C G T C A T C G A C G T A T A C G T A C G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G