Information for 15-TCTCAGTGAGAGG (Motif 17)

A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G
Reverse Opposite:
A G T C G A T C A C G T A T G C G A C T A G T C G T C A T A G C A C G T A T C G C G T A A T C G G T C A
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.778
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif43.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets54.8 +/- 18.0bp
Average Position of motif in Background50.5 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTCAGTGAGAGG-
--TGAGTGACAGSC
 A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCTCAGTGAGAGG
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTCAGTGAGAGG
-NTGATTGACAGN
 A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCTCAGTGAGAGG
-BTGABTGACAGS
 A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTCAGTGAGAGG
-GAAAGTGAAAGT
 A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTCAGTGAGAGG
DCTCAGCAGG---
 A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTCAGTGAGAGG---
AGGTCACGGAGAGGTCA
 A C G T A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G A C G T A C G T A C G T
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTCAGTGAGAGG--
NCGCAGCGGGGGGTC
 A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTCAGTGAGAGG--
DCHCAGCAGGRGGCC
 A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCTCAGTGAGAGG
BAGTCATANTGAAAG-
 A C G T A C G T A C G T A C G T A T G C G A C T A T G C C G T A A T C G C A G T A C T G C T G A T A C G C G T A C A T G T C A G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T