Information for 10-AAGAGGAAACTGC (Motif 13)

G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A A C T G A C G T A C G T A C G T A G T C G T A C A G C T A G T C A G C T A C G T
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.3 +/- 28.9bp
Average Position of motif in Background38.1 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGAGGAAACTGC
-AGAGGAA-----
 G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGAGGAAACTGC
GAGAACCGAAACTG-
 A C G T A C G T G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGGAAACTGC
GGAAANTGAAACTNA
 A C G T A C G T G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAGAGGAAACTGC--
---AGGAAACAGCTG
 G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGGAAACTGC
GAAAMTGAAACT--
 A C G T G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGAGGAAACTGC
-AATGGAAAAT--
 G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AAGAGGAAACTGC--
-----NHAACBGYYV
 G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGAGGAAACTGC
-AATGGAAAAT--
 G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGAGGAAACTGC
-NNTGGAAANN--
 G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGGAAACTGC
GAAACTGAAACT--
 A C G T G T C A C T G A A C T G C T G A A C T G A C T G C G T A C G T A C G T A A G T C A C G T A C T G A T G C
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T