Information for 10-CAACAGGGGA (Motif 10)

G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A
Reverse Opposite:
A G C T A T G C G A T C G T A C A T G C A C G T T C A G A G C T C G A T C A T G
p-value:1e-13
log p-value:-3.070e+01
Information Content per bp:1.675
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.85%
Number of Background Sequences with motif1042.8
Percentage of Background Sequences with motif2.16%
Average Position of motif in Targets52.7 +/- 27.2bp
Average Position of motif in Background50.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CAACAGGGGA
ATGCAACAGGTGG
 A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CAACAGGGGA--
GAGCAACAGGTGGTT
 A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAACAGGGGA
CACAGCAGGGGG
 A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAACAGGGGA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CAACAGGGGA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CAACAGGGGA--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAACAGGGGA
GTAAACAG----
 A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAACAGGGGA
TGTAAACAGGA--
 A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAACAGGGGA---
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A A C G T A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAACAGGGGA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T G T A C G C T A C T G A A G T C C G T A T A C G C A T G C T A G T A C G T C G A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A