Information for 4-STWGWGTWGWTYT (Motif 7)

A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A C G A T A G T C C G T A C G T A A G T C C G T A A G T C C G T A C G T A A T G C
p-value:1e-9
log p-value:-2.112e+01
Information Content per bp:1.831
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.4 +/- 25.5bp
Average Position of motif in Background59.7 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:STWGWGTWGWTYT
CTTGAGTGGCT--
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:STWGWGTWGWTYT-----
---GTNTTGTTGTGANNT
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:STWGWGTWGWTYT---
-NNNTGTTGTTGTTNG
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:STWGWGTWGWTYT-----
--NNTTTTGTTTTGATNT
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:STWGWGTWGWTYT--
----TGTGGATTNNN
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:STWGWGTWGWTYT----
-TTCAATTGTTCTAAAA
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:STWGWGTWGWTYT-
--NNTGTGGATTSS
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:STWGWGTWGWTYT--
-NNGTANTGTTTTNC
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:STWGWGTWGWTYT
-TTRAGTGSYK--
 A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---STWGWGTWGWTYT-
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A T C G A C G T C G A T A C T G C G A T A C T G A C G T C G A T A C T G C G T A A C G T A G T C A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G