Information for 5-GGACTTGGCAAGTTTG (Motif 11)

A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
Reverse Opposite:
A G T C C G T A C G T A C G T A A G T C A C G T C G A T A C T G A G T C G T A C C G T A C T G A A C T G A C G T A G T C G T A C
p-value:1e-5
log p-value:-1.180e+01
Information Content per bp:1.915
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.7 +/- 29.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGACTTGGCAAGTTTG
---CTTGGCAA-----
 A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGACTTGGCAAGTTTG
--NNTTGGCANN----
 A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGACTTGGCAAGTTTG
---NTTGGCANN----
 A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGACTTGGCAAGTTTG
----AAGGCAAGTGT-
 A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGACTTGGCAAGTTTG
----TTGGCA------
 A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGACTTGGCAAGTTTG
TGATGACGTGGCAN-----
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGACTTGGCAAGTTTG
NGATGACGTGGCAN-----
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GGACTTGGCAAGTTTG
--------CAAGCTT-
 A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGACTTGGCAAGTTTG--
---CCTTGCAATTTTTNN
 A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

MAF::NFE2/MA0501.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGACTTGGCAAGTTTG
ATGACTCAGCAATTT--
 A C G T A C T G A C T G C G T A A G T C A G C T A C G T A C T G C T A G A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G
T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T A C G T A C G T