Information for 4-AGGGCHGCGG (Motif 14)

C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C C T A G A C T G A T G C A T G C G T A C G C A T
p-value:1e-4
log p-value:-9.879e+00
Information Content per bp:1.767
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif10.78%
Number of Background Sequences with motif3415.9
Percentage of Background Sequences with motif7.12%
Average Position of motif in Targets45.0 +/- 27.7bp
Average Position of motif in Background51.2 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGGCHGCGG----
--AGCAGCTGCTNN
 C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGGCHGCGG---
---NCAGCTGCTG
 C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGGCHGCGG
CAAGATGGCGGC--
 A C G T A C G T A C G T A C G T C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCHGCGG
TNNGGGCAG---
 A C G T A C G T C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGGCHGCGG---
--GACAGCTGCAG
 C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGGCHGCGG
--ANCAGCTG
 C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGGGCHGCGG--
--AGCAGCTGCT
 C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCHGCGG-----
NNNNAGCAGCTGCTGAN
 A C G T A C G T C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGGCHGCGG
CAACGTCCGCGG
 A C G T A C G T C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCHGCGG--
NGNGACAGCTGCN
 A C G T C G T A A C T G A T C G A T C G A G T C G A T C A C T G A G T C T C A G A C T G A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A