Information for 8-GGSKGCWTCCCAK (Motif 12)

A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
Reverse Opposite:
G T C A C A G T A C T G C T A G A C T G C G T A C G T A A C T G A G T C G T A C A T C G A G T C A T G C
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.9 +/- 23.3bp
Average Position of motif in Background52.8 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGSKGCWTCCCAK----
NNNTCCATCCCATAANN
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGSKGCWTCCCAK
TGGCAGNCTGCCAG
 A C G T A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGSKGCWTCCCAK
GGGGGAATCCCC-
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGSKGCWTCCCAK
AGGGGAATCCCCT
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGSKGCWTCCCAK
NGGGGATTTCCC--
 A C G T A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGSKGCWTCCCAK
AGGGGATTCCCCT
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGSKGCWTCCCAK
-GGGGATTTCC--
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGSKGCWTCCCAK-
----HTTTCCCASG
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGSKGCWTCCCAK
----GCTTCC---
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGSKGCWTCCCAK
GGGGATTTCC---
 A T C G A C T G A T G C A C T G A C T G A G T C C G A T A C G T A G T C A G T C A G T C G C T A A C G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T