Information for 6-TAGAGAGAAACCCTAT (Motif 6)

C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T
Reverse Opposite:
C T G A G C A T C T G A C T A G C T A G C T A G A G C T C G A T A C G T A G T C A G C T A T G C A G C T G A T C A G C T C G T A
p-value:1e-400
log p-value:-9.231e+02
Information Content per bp:1.670
Number of Target Sequences with motif229.0
Percentage of Target Sequences with motif34.18%
Number of Background Sequences with motif102.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets51.5 +/- 33.7bp
Average Position of motif in Background41.2 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six3/MA0631.1/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGAAACCCTAT-
ANANGTGATACCCTATN
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGAAACCCTAT-
ANANGTGATACCCTATN
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAGAGAGAAACCCTAT
--GGGGGAATCCCC--
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T
A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TAGAGAGAAACCCTAT
TTGACCGAGAATTCC---
 A C G T A C G T C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TAGAGAGAAACCCTAT-
GGAAAGCGAAACCAAAAC
 A C G T C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TAGAGAGAAACCCTAT
-GGCGGGAARN-----
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGAAACCCTAT-
ANANGTGATACCCCATT
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGAAACCCTAT-
ANANNTGATACCCTATN
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TAGAGAGAAACCCTAT
---ACTGAAACCA---
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TAGAGAGAAACCCTAT
TGGCGGGAAAHB----
 C G A T T C G A C T A G T C G A A T C G C T G A T C A G G T C A C G T A T C G A A G T C A G T C G A T C A G C T C G T A A G C T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T