Information for 5-TCCCACATTGAYTACA (Motif 5)

C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
Reverse Opposite:
A G C T C T A G A C G T T C G A C T G A A C G T T A G C C G T A T C G A A G C T A C T G A C G T C A T G A T C G A T C G C G T A
p-value:1e-415
log p-value:-9.562e+02
Information Content per bp:1.698
Number of Target Sequences with motif204.0
Percentage of Target Sequences with motif30.45%
Number of Background Sequences with motif46.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets46.7 +/- 32.0bp
Average Position of motif in Background40.5 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCCACATTGAYTACA
NWAACCACADNN------
 A C G T A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCCCACATTGAYTACA
HTTTCCCASG---------
 A C G T A C G T A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCCACATTGAYTACA
TTGCAACATN-------
 A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCCCACATTGAYTACA
AAACCACAGAN------
 A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCCCACATTGAYTACA
TTMACACCTT-------
 A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TCCCACATTGAYTACA
----ACAAAG------
 C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TCCCACATTGAYTACA
TGTTCCCATTGTGTACT
 A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TCCCACATTGAYTACA
NNAGTCCCACTCNNNN----
 A C G T A C G T A C G T A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TCCCACATTGAYTACA
KTTCACACCT--------
 A C G T A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TCCCACATTGAYTACA
NAAACCACAG--------
 A C G T A C G T C G A T A T G C A T G C G A T C C G T A G T A C C T G A A G C T C G A T A T C G T G C A A G C T A G C T T C G A A G T C C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T