Information for 4-CMTTACATTYATARGG (Motif 4)

A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
Reverse Opposite:
A G T C G A T C G A T C A C G T C T G A A G C T T C A G T G C A C T G A A C G T A C T G A G C T T C G A C T G A C A T G T A C G
p-value:1e-420
log p-value:-9.682e+02
Information Content per bp:1.720
Number of Target Sequences with motif209.0
Percentage of Target Sequences with motif31.19%
Number of Background Sequences with motif50.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets53.7 +/- 31.9bp
Average Position of motif in Background57.5 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CMTTACATTYATARGG-
GACCACATTCATACAAT
 A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CMTTACATTYATARGG--
----ACATTCATGACACG
 A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CMTTACATTYATARGG
NNNTAACAATTATAN--
 A C G T A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CMTTACATTYATARGG
NNCATTCATTCATNNN-
 A C G T A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CMTTACATTYATARGG
NNNNNNCTTTTATAN--
 A C G T A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CMTTACATTYATARGG
NNNNNNCTTTTATAN--
 A C G T A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CMTTACATTYATARGG
------TTTTATKRGG
 A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PB0198.1_Zfp128_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CMTTACATTYATARGG
-TGTATATATATACC-
 A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CMTTACATTYATARGG
GGACTGAATTCATGCC-
 A C G T A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CMTTACATTYATARGG
---CACATTCCAT---
 A T G C G T A C A G C T A G C T C T G A A G T C C G T A A G C T A C G T A G T C C T G A G A C T C G T A C T A G C T A G T A C G
A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T