Information for 3-CATACTGGAGAGAAAC (Motif 3)

A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
Reverse Opposite:
A C T G A G C T A G C T A C G T G A T C C G A T A G T C G C A T A G T C A G T C C G T A T A C G A G C T C T G A A C G T A C T G
p-value:1e-563
log p-value:-1.298e+03
Information Content per bp:1.805
Number of Target Sequences with motif237.0
Percentage of Target Sequences with motif35.37%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.1 +/- 26.6bp
Average Position of motif in Background53.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CATACTGGAGAGAAAC
--TACTGGAAAAAAAA
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CATACTGGAGAGAAAC-----
-NNCCTGNAAAAAAAAAAAAA
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CATACTGGAGAGAAAC-----
-NNCCTGNAAAAAAAAAAAAA
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CATACTGGAGAGAAAC
-ATTCTCGCGAGA---
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CATACTGGAGAGAAAC
----CWGGCGGGAA--
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:6
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CATACTGGAGAGAAAC
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

TBX19/MA0804.1/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CATACTGGAGAGAAAC
TTTCACACCTAGGTGTGAAA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CATACTGGAGAGAAAC-
-----TGGCGGGAAAHB
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CATACTGGAGAGAAAC
----CGGAAGTGAAAC
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CATACTGGAGAGAAAC
-----GGGCGGGAAGG
 A G T C C G T A A G C T C T G A A G T C G C A T C T A G T C A G C G T A C T A G C G T A C T A G C G T A C T G A C T G A G T A C
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G