Information for 23-GCAGGACAAG (Motif 21)

A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.0 +/- 9.9bp
Average Position of motif in Background55.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCAGGACAAG----
--AGGTCAAGGTCA
 A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGACAAG-----
NNAGGGACAAGGGCNC
 A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGGACAAG----
--AGGTCAAGGTCA
 A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGACAAG
TRAGGTCA--
 A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAGGACAAG
--AGGTCA--
 A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCAGGACAAG--
--AAAACAATGG
 A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGACAAG
NACAGGAAAT-
 A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCAGGACAAG
-AAGGTCAC-
 A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCAGGACAAG--
--RNAACAATGG
 A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGACAAG
TGGCGGGAAAHB
 A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C T G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G