Information for 23-AAGCTGTTAGGCAAAG (Motif 19)

C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
Reverse Opposite:
G T A C A C G T A G C T C G A T A C T G A G T C A G T C A C G T G T C A C T G A A G T C C G T A T A C G A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 24.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGCTGTTAGGCAAAG
-AGGTGNCAGACAG--
 C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGCTGTTAGGCAAAG
AAGGTGTKAA------
 C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGCTGTTAGGCAAAG
AGGACGCTGTAAAGGGA--
 A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGCTGTTAGGCAAAG
AAGACGCTGTAAAGCGA--
 A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGCTGTTAGGCAAAG
AAGACGCTGTAAAGCGA--
 A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGCTGTTAGGCAAAG
CCAGCTGTTN-------
 A C G T C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGCTGTTAGGCAAAG
CAGCTGTT--------
 C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAGCTGTTAGGCAAAG
-AGGTGTCA-------
 C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGCTGTTAGGCAAAG
ACAGCTGTTV-------
 A C G T C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGCTGTTAGGCAAAG
-AGGTGHCAGACA---
 C G T A C G T A A C T G A T G C A C G T A C T G A G C T A C G T C G T A A C T G C T A G A G T C C G T A C T G A C G T A A C T G
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T