Information for 23-GAGGACMWWAARC (Motif 17)

C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T C G A T C G A T C G A T A C G T A C T G A C G T A G T C A G T C A C G T A G T C
p-value:1e-13
log p-value:-3.066e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 28.8bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGACMWWAARC
ARGAGGMCAAAATGW
 A C G T A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGGACMWWAARC
GGGAGGACNG-----
 A C G T A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGGACMWWAARC
TRAGGTCA------
 A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGACMWWAARC--
GGAGGTCATTAATTAT
 A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGGACMWWAARC--
TAAGGTAATAAAATTA
 A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGACMWWAARC----
ACGGCCATAAAATTAAT
 C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGACMWWAARC--
AAAGGTAATAAAATTT
 A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGGACMWWAARC
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGGACMWWAARC--
TAAAGTCGTAAAACAT
 A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGGACMWWAARC-
TTTAGAACAATAAAAT
 A C G T A C G T C T A G C G T A A C T G A C T G C G T A A G T C G T C A C G T A C G T A C G T A C G T A C T G A A G T C A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T