Information for 19-CCCGGCCACGTGATTC (Motif 29)

A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G A G T C A G T C A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.439e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.7 +/- 18.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCCGGCCACGTGATTC
-CCGGTCACGTGA---
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CCCGGCCACGTGATTC
----KCCACGTGAC--
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCCGGCCACGTGATTC
---GGTCACGTGA---
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CCCGGCCACGTGATTC
----GCCACGTGT---
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CCCGGCCACGTGATTC
----GCCACGTG----
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CCCGGCCACGTGATTC
-----NCACGTGACN-
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCCGGCCACGTGATTC
----ACCACGTGAC--
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CCCGGCCACGTGATTC
----ACCACGTGCTC-
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCCGGCCACGTGATTC
----NCCACGTG----
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCCGGCCACGTGATTC
CCNNANCACGTGGTCN
 A G T C A G T C A G T C A C T G A C T G A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A A C G T A C G T A G T C
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A