Information for 10-YHCTBTTGCCATKGCA (Motif 7)

G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A
Reverse Opposite:
C A G T A C T G A T G C G T C A C T G A C G A T C A T G C T A G A T G C C G T A C T G A T A G C G C T A A C T G C T A G C T G A
p-value:1e-12
log p-value:-2.971e+01
Information Content per bp:1.616
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif223.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets60.5 +/- 23.9bp
Average Position of motif in Background50.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:YHCTBTTGCCATKGCA-
---GGTTGCCATGGCAA
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T
A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:YHCTBTTGCCATKGCA--
--CGGTTGCCATGGCAAC
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T A C G T
A C G T A C G T A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:YHCTBTTGCCATKGCA-
---NGTTGCCATGGCAA
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T
A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:YHCTBTTGCCATKGCA---
----GTTGCCATGGCAACM
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

RFX5/MA0510.2/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:YHCTBTTGCCATKGCA---
---CGTTGCCATGGCAACG
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:YHCTBTTGCCATKGCA--
----GTTGCCATGGNAAC
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

RFX2/MA0600.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YHCTBTTGCCATKGCA---
---CGTTGCCATGGCAACG
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YHCTBTTGCCATKGCA
TKCTGTTCCA------
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YHCTBTTGCCATKGCA
--CTGTTGCTAGGS--
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:YHCTBTTGCCATKGCA---
---CGTTGCCATGGCAACN
 G A C T G A T C A G T C C G A T A T C G A G C T A C G T A T C G G A T C G T A C C G T A A G C T C A G T T A C G G T A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G