Information for 24-TGTGCCAAATGGA (Motif 37)

A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C T G A C T G A G T C C G T A A G T C C G T A
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 26.0bp
Average Position of motif in Background48.6 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGTGCCAAATGGA
GGTGCCAAGT---
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTGCCAAATGGA
CGTGCCAAG----
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTGCCAAATGGA
--TGCCAA-----
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTGCCAAATGGA
-TTGCCAAG----
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTGCCAAATGGA
-ATGCCAACC---
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTGCCAAATGGA
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGTGCCAAATGGA
---GCCATATGGT
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTGCCAAATGGA
-ATGCCCACC---
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTGCCAAATGGA
---AACAKATGGY
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTGCCAAATGGA
---ACCATATGGT
 A C G T A C T G A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T