Information for 18-AKARCYCCMAGWK (Motif 27)

C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T
Reverse Opposite:
G T C A C G A T A G T C A G C T A C G T A C T G A C T G C T A G A C T G A G C T C G A T G T A C A C G T
p-value:1e-7
log p-value:-1.829e+01
Information Content per bp:1.818
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.2 +/- 31.1bp
Average Position of motif in Background48.9 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0201.1_Zfp281_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AKARCYCCMAGWK-
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AKARCYCCMAGWK
TATCGACCCCCCACAG
 A C G T A C G T A C G T C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AKARCYCCMAGWK
-AAACCGCAA---
 C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----AKARCYCCMAGWK
NNNNGGTACCCCCCANN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AKARCYCCMAGWK---
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AKARCYCCMAGWK
GGACCACCCACG-
 C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AKARCYCCMAGWK--
AAGCCCCCCAAAAAT
 C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AKARCYCCMAGWK
---GCTCCG----
 C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AKARCYCCMAGWK--
AAATTCCCCCCGGAAGT
 A C G T A C G T C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AKARCYCCMAGWK-
----TGCCCAGNHW
 C G T A A C T G C G T A C T G A A G T C A G T C A G T C A G T C G T C A C T G A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A