Information for 10-CAGCGGCTTT (Motif 30)

T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
Reverse Opposite:
C G T A C T G A G T C A C A T G G T A C G A T C C T A G A G T C C G A T A T C G
p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.705
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.40%
Number of Background Sequences with motif916.2
Percentage of Background Sequences with motif1.95%
Average Position of motif in Targets49.5 +/- 27.8bp
Average Position of motif in Background50.1 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGGCTTT
AGCAGCTGCT--
 A C G T A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCTTT
AGCAGCTGCTNN
 A C G T A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGCGGCTTT
NCAGCTGCTG-
 A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCTTT
CAGCTGNT--
 T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCTTT
CGCAGCTGCG--
 A C G T A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGCGGCTTT--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf21/MA0832.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGGCTTT---
NCAACAGCTGTTGC
 A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T A C G T A C G T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGGCTTT
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------CAGCGGCTTT
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCTTT
CAGCTGTT--
 T A G C G C T A T C A G A G T C C T A G C A T G G T A C C A G T A G C T C G A T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T