Information for 16-MGTGAWCCMWGAC (Motif 24)

G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 20.1bp
Average Position of motif in Background25.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---MGTGAWCCMWGAC-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---MGTGAWCCMWGAC-
NGCANTCATGCGTGACG
 A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MGTGAWCCMWGAC
-ATAATCCC----
 G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---MGTGAWCCMWGAC-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PAX9/MA0781.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---MGTGAWCCMWGAC-
TGCAGTCATGCGTGACG
 A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MGTGAWCCMWGAC---
--TGACCTTTGACCTC
 G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MGTGAWCCMWGAC----
--TGACCTCTGACCCCN
 G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---MGTGAWCCMWGAC-
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--MGTGAWCCMWGAC
SCAGYCADGCATGAC
 A C G T A C G T G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MGTGAWCCMWGAC-
--CGCCCCCTGACA
 G T A C A C T G A C G T A C T G C G T A G C A T A G T C A G T C G T A C C G A T A C T G C G T A A G T C A C G T
A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A